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pyMol

Learn how to take take full advantage of pyMol and the powerfull tricks that makes visualizing molecular structures a dream. Pymol is fairly well documented in the pymol wiki page, and you should check out that page for a more complete documentation on pyMol. Many however find that the wiki page is a bit cumbersome to use, so the goal here is simply to point out some of the most usefull and nice looking techniques.

Content:

The Basics


A brief overview of the basic stuff in pyMol.

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Displaying Electron Density Maps


This tutorial explains how to display the crystallographic electron density maps in pyMol.

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Make a Protein Build up Animation


A tutorial describing how to make a animation of a protein building up one residue at the time by combining pyMol and python.

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Glossy surface


Many people ask how to get the glossy surface effect with pyMol. Here is a very easy step by step instruction on how to do this.

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